Dukes, I don't know as much as most of these guys do, But I will try to see if we can get you a solution to this, If you are in the car with power running to the ALP CPU with the B/T connected what does it do? nothing?
I just want to be clear with the issue you are having, What does it do when you run power to ALP CPU with the B/T Mod installed and the App running on the phone?.
Try this, turn the ALP on and wait for the LED to finish blinking, when it does turn the app on, on your phone and listen for a bleep, does it make this sound?